Class | Description |
---|---|
CifReader |
A true line-free CIF file reader for CIF files.
|
MessagePackReader |
A simple MessagePack reader.
|
MMCifReader |
mmCIF files are recognized prior to class creation.
|
MMCifValidationParser | |
MMTFReader |
JmolData RCSB MMTF (macromolecular transmission format) file reader
see https://github.com/rcsb/mmtf/blob/master/spec.md
full specification Version: v0.2+dev (as of 2016.08.08) is
implemented,including:
reading atoms, bonds, and DSSP 1.0 secondary structure
load =1f88.mmtf filter "DSSP1"
[Note that the filter "DSSP1" is required, since mmtf included DSSP 1.0
calculations, while the standard for Jmol itself is DSSP 2.0.
|
MSCifRdr | |
MSRdr |
generalized modulated structure reader class for CIF and Jana
-- includes Fourier, Crenel, Sawtooth; displacement, occupancy, and Uij
-- handles up to 6 modulation wave vectors
-- commensurate and incommensurate, including composites
-- not handling _cell_commen_t_section_1
|
Subsystem |